The Why and How of Reproducible Computational Research

Reproducible research hit the mainstream in the last few years, after more than two decades of back-alley campaigns. Feature articles have glossed the pages and covers of not only the most prominent science publications, but also the news media. Yet two crucial discussions are seldom clearly captured: Why (we care) and How (to do it). The why is today more important than ever: the success and credibility of science are on the line. Perverse incentives in academia interrupt our best intentions, so let’s agree on where our responsibilities lie with reproducibility. The how of reproducible research, on the other hand, can be surprisingly contentious. Should we use spreadsheets (no), point-and-click GUIs (it depends), or version control (yes)? What are the commitments we need to make—whether student, mentor, author, reader, funder? Often the focus of the conversation has been on open data and code. In my group, we have been practicing open science for years, but we found the hard way that open code is merely a first step. We need to exhaustively document our computational research, to encourage and accept publication of negative results, and to apply defensive tactics against bad code: version control, modular code, testing, and code review. The tools and methods require training, but if you establish the why, the how will follow.

Bio

Lorena A. Barba is an associate professor of mechanical and aerospace engineering at the George Washington University in Washington, DC. She holds a PhD in aeronautics from the California Institute of Technology and BSc/PEng degrees in mechanical engineering from Universidad Técnica Federico Santa María, Chile. Her research includes computational fluid dynamics, high-performance computing, computational biophysics, and animal flight. An international leader in computational science and engineering, she is also a long-standing advocate of open source software for science and education, and she is well known for her courses and open educational resources. She was a recipient of the 2016 Leamer-Rosenthal Award for Open Social Sciences, and in 2017, was nominated and received an honorable mention in the Open Education Awards for Excellence of the Open Education Consortium.

Speaker

Lorena Barba

Date

Thursday, September 21, 2017

Time

1 pm - 2 pm

Location

IACS Seminar Room